Authors:
Sinah Drenske | Leibniz Institute for Zoo and Wildlife Research / Institute of Ecology, Technische Universität Berlin | Germany
Alina Theresa Berger | Leibniz Institute for Zoo and Wildlife Research / Institute of Ecology, Technische Universität Berlin | Germany
Alina Doreen Stemmer | Leibniz Institute for Zoo and Wildlife Research / Department of Biology, Chemistry, Pharmacy, Freie Universität Berlin | Germany
Dr. Aimara Planillo | Leibniz Institute for Zoo and Wildlife Research / Estación Biológica de Doñana (EBD), Spanish National Research Council (CSIC)
Dr. Conny Landgraf | Leibniz Institute for Zoo and Wildlife Research | Germany
Anke Schmidt | Leibniz Institute for Zoo and Wildlife Research | Germany
Dr. Kathleen Röllig | Leibniz Institute for Zoo and Wildlife Research | Germany
Prof. Dr. Melanie Dammhahn | Department of Behavioural Biology, University of Münster / Joint Institute for Individualisation in a Changing Environment (JICE) | Germany
Prof. Dr. Jörns Fickel | Leibniz Institute for Zoo and Wildlife Research / Institute for Biochemistry and Biology, Molecular Ecology and Evolution, Universität Potsdam | Germany
Prof. Dr. Stephanie Kramer-Schadt | Leibniz Institute for Zoo and Wildlife Research / Institute of Ecology, Technische Universität Berlin | Germany
Urbanization alters animal habitats, creating selective pressures on wildlife and underscoring the growing relevance of cities for biodiversity conservation. This study investigates how urbanization affects the genetic structure and survival of Eurasian red squirrels (Sciurus vulgaris) across three contrasting habitats in Berlin, Germany: a woodland area, a walled urban cemetery, and a highly frequented urban park used for dog walking, recreational stays and public events such as festivals. Since 2021, red squirrels have been live-trapped biannually in spring and autumn across three study sites representing different levels of urbanization, resulting in a sample of over 140 marked individuals.We genotyped all individuals at 16 microsatellite loci and analysed genetic structure using Bayesian clustering with STRUCTURE. Additionally we calculated standard population genetic metrics to assess genetic diversity and differentiation among sites. Capture–recapture data were analysed using Cormack–Jolly–Seber models to estimate survival and detection probabilities in open populations. Our results reveal detectable genetic structuring between sites, potentially shaped by urban fragmentation.The woodland area and the cemetery show similar genetic structure while the urban park not. The urban park showed also a higher inbreeding rate than the other study sites. Survival varied with season, sex, and degree of urbanization, with lower survival for females in urban parksSurvival probabilities differed between males and females depending on site-specific urbanization levels. This study shows how urbanization shapes genetic structure and survival in red squirrels, offering insights into their persistence in cities and highlighting factors that support long-term population viability in urban environments.